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Full-Time
Faculty
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Jason
Xuan , Ph.D., Associate Director, Associate Professor of Electrical, Computer, and Biomedical Engineering
Research Scientist
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Zuyi Wang , Ph.D. (biomedical engineering): Networked gene-pathway association, IDMD project, proteomics data analysis, SNP associative analysis by machine learning
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Jianghui Xiong , M.S. (cell biology): Multilevel/multiscale data, knowledge, evidence discovery and integration; associative analysis; miRNA and DNA methylation
Graduate Research Assistant
COMPUTATIONAL GENOMICS
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Yuanjian Feng (doctoral graduate research assistant, Fall 2004 - present): CNV detection, CIN index/feature extraction, tree of phenotype (stability analysis), SNP detection and assessment (SVM-SFFS/RPT)
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Ting Gong (doctoral graduate research assistant, Fall 2004 - present): Computational dissection of composite
molecular signatures and modules (nPICA-THC, nICA/nPICA GRN modeling)
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Lily Li Chen (doctoral graduate research assistant, Spring 2007 - present): Knowledge-driven biomarker discovery and validation; multi-level data integartion for regualtory network reconstruction
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Guoqiang Yu (doctoral graduate research assistant, Fall 2006 - present): Stage-2 SNP/GEI complex interaction , inference of complex interaction models, CNV detection, PUG-OVRSVM
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Li Chen (doctoral graduate research assistant, Fall 2006 - present): Discrete-field nonlinear classification and RPT (SVM/kNN/MLP/MECPM), DCE-MRI (NSC-CAM) , Stage-1 SNP screening
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Lei Song (doctoral graduate research assistant, Fall 2008 - present): Practice of real SNP data analysis, CNV detection and CNV-feature extraction, inference of complex interaction models
COMPUTATIONAL BIOLOGY AND EPIGENETICS
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Yitan
Zhu (doctoral graduate research assistant, Spring 2004 - present): VISDA, multi-task data clustering, unmixing differential gene expression programs, tissue heterogeneity correction
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Bai Zhang (doctoral graduate research assistant, Fall 2006 - present): DDN, ESRNN , CAM-nWCA of pathway composite, CNV detection (SFNM-EM-MDL-HMM-MICM), THC, epigenetics
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Chen Wang (doctoral graduate research assistant, Fall 2006 - present): Integrative netwrok analysis for pathway dissection; regulatory network reconstruction by mNCA; gene module discovery by ICA
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Yuji Zhang (doctoral graduate research assistant, Fall 2005 - present): Inferring gene regulatory network by recurrent neural networks and swarm intelligence; netwrok motif analysis; protein-protein interactions (PPIs) for pathway building
COMPUTATIONAL BIOMEDICAL IMAGING
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Chu-Chuan (JJ) Liu (doctoral graduate student, Fall 2003 - present): Transmission and reflective ultrasound projection and tomographic imaging
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Bin Zhou (doctoral graduate research assistant, Fall 2006 - present): Polarization cellular/tissue imaging (feature extraction and classification); multispectral polarization imaging; motion analysis for adaptive radiation therapy
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Tsung-Han Chan (visiting doctoral graduate research assistant, Summer 2007, Spring 2008 - present): Blind source separation theory and algorithm, dissection/characterization of DCE-MRI, optical imaging, dPET, fMRI
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Yimo Tao (doctoral graduate research assistant, Fall 2006 - present): Content-based medical image analysis, understanding, and retrieval
Additional Graduate Student
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Sook S. Ha (doctoral graduate student, Fall 2006 - present): Statistical learning and informational visualization for bioinformatics
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Lu Jin (full-time master graduate student, Spring 2008 - present): Cluster computing for genomic data analysis
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Charles S. Bartlett (part-time doctoral graduate student, Spring 2008 - present): CNV detection and CNV-feature extraction, microarray data analysis
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Yibin Dong (part-time doctoral graduate student, Fall 2004 - present): Compute cluster server based biomedical computing, molecular marker discovery and validation
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Jane Liu (part-time doctoral graduate student, Fall 2002 - present): Grid-enabled data storage and management for biomedical research
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CBIL
Guidelines
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Copyright
©2004, Computational Bioinformatics and Bioimaging Laboratory
(CBIL), Virginia Tech.
Last
Updated: 01/01/2006. Suggestions/Comments
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